BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB030B07LP1|AL429168
(498 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig152 702 0.0
>3x_Contig152
Length = 823
Score = 702 bits (335), Expect = 0.0
Identities = 439/498 (88%), Gaps = 2/498 (0%)
Strand = Plus / Plus
Query: 1 tacaatattattaggggtttccc-attgtcaccttcccgacccacaaggagacggggatt 59
||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||
Sbjct: 92 tacaatattattaggggtttccccacggtcaccttcccgacccacaaggagacggggatt 151
Query: 60 cttacttattttatatcccgcggattcatgttatgaatccgcggaattattatattatat 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 152 cttacttattttatatcccgcggattcatgttatgaatccgcggaattattatattatat 211
Query: 120 tatattatattatattrtatbbnbwdnbdkrataktartkktktdtdgdtdagagtataa 179
|||||||||||||||| ||| ||| || | | | | | |||||||||
Sbjct: 212 tatattatattatattatatttttaaatataataataattatatataaataagagtataa 271
Query: 180 wadtkdtttattgatctcatgctatactccccccccttcctgtsgcacacgattggtgcg 239
| | ||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 272 aaataatttattgatctcatgctatactccccccccttcctgtcgcacacgattggtgcg 331
Query: 240 cagatatkgarggkggggagtagggagtaataaatttaggataaccattattataataat 299
||||||| || || ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 332 cagatattgaagggggggagtagggagtaataaatttaggataaccattattataataat 391
Query: 300 ttattattatantantatttttncycybttgtctctcaccctacgaatgtagggtgatga 359
| ||||||||| || ||||||| | | ||||||||||||||||||||||||||||||
Sbjct: 392 taattattataataatatttttcccccgcggtctctcaccctacgaatgtagggtgatga 451
Query: 360 gccgcggggtaattcttatttattatatattataatattrvbrvtarrbbssgcggnctc 419
||||||||||||||||||||||||||||||||||||||| || |||| |||
Sbjct: 452 gccgcggggtaattcttatttattatatattataatattaataataaaccccgcggactc 511
Query: 420 ctttaaaggagt-cgcgganaaagtattatccgcgcctcatccattataaaggatgaggc 478
|||||||||||| ||||| |||||||||||||||||||||||||||| |||||||| ||
Sbjct: 512 ctttaaaggagtccgcgggaaaagtattatccgcgcctcatccattatcaaggatgatgc 571
Query: 479 gcggattaatatacatat 496
||||||||||||||||||
Sbjct: 572 gcggattaatatacatat 589
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.45 0.719 1.36
Gapped
Lambda K H
1.45 0.719 1.36
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3077
Number of Sequences: 1807
Number of extensions: 3077
Number of successful extensions: 190
Number of sequences better than 1.0e-20: 1
length of query: 498
length of database: 10,358,551
effective HSP length: 15
effective length of query: 483
effective length of database: 10,331,446
effective search space: 4990088418
effective search space used: 4990088418
T: 0
A: 40
X1: 5 (10.5 bits)
X2: 14 (29.3 bits)
S1: 11 (23.5 bits)
S2: 47 (98.9 bits)